Bump scikit-learn from 1.4.0 to 1.5.0 in /gui/api #411
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Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 1.4.0 to 1.5.0. - [Release notes](https://github.com/scikit-learn/scikit-learn/releases) - [Commits](scikit-learn/scikit-learn@1.4.0...1.5.0) --- updated-dependencies: - dependency-name: scikit-learn dependency-version: 1.5.0 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com>
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📚 Documentation Coverage Report
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📊 Lines of Code Report
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🔍 Type Coverage Report
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@copilot PY3PLEX_PATH} 48 | 49 | # Create data directory target worker: failed to solve: process "/bin/sh -c pip install -e ${PY3PLEX_PATH}" did not complete successfully: exit code: 1
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@copilot gui tests fail |
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@copilot merge from master + rerun tests |
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* Optimize GUI test suite and add GUI section to main README (#409) * Initial plan * Optimize GUI tests and add GUI section to main README Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * [WIP] Remove emojis from all areas (#413) * Initial plan * Remove all emojis from codebase Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Remove remaining emojis from all files Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Update library description to 'multilayer networks' * Remove PR stats comments from CI and add multi-language LOC counting (#418) * Initial plan * Remove PR comment steps from CI workflows and add multi-language LOC counting Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Remove Codecov upload step from tests workflow Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Move GUI documentation from markdown to RST format (#416) * Initial plan * Add GUI documentation in RST format Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Remove GUI markdown documentation files from gui folder Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Update README.md * Refactor multinet.py: Extract helpers, eliminate eval(), improve organization (#420) * Initial plan * Refactor multinet.py: Extract helper functions and improve organization - Extract visualization logic into helper functions (_draw_diagonal_layers, _draw_multiedges_for_type, _visualize_diagonal_style, _visualize_hairball_style) - Extract encoding logic into helper functions (_encode_multilayer_network, _encode_multiplex_network) - Simplify visualize_network method from 147 lines to ~70 lines - Simplify _encode_to_numeric method from 66 lines to ~15 lines - Add section comments to organize methods by responsibility - Improve docstrings and add type hints to key methods - Reduce code duplication in visualization branches Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add helper method _create_graph to reduce code duplication - Add _create_graph() helper method to centralize graph creation logic - Refactor _initiate_network to use _create_graph - Refactor add_dummy_layers to use _create_graph - Refactor _unfreeze to use more concise conditional - Refactor split_to_layers to use more concise conditional - Reduces 5 instances of if/else directedness checks Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Replace all eval() calls with safer getattr() for security - Replace eval in _generic_edge_dict_manipulator with getattr - Replace eval in _generic_edge_list_manipulator with getattr - Replace eval in _generic_node_dict_manipulator with getattr - Replace eval in _generic_node_list_manipulator with getattr - Replace eval in aggregate_edges with getattr - Improves code security by eliminating string-based code execution - Makes code more readable and maintainable - Reduces file size from 1915 to 1903 lines Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Auto-update LOC badge in README via workflow (#425) * Initial plan * Fix LOC badge auto-update workflow and update current value Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Reduce GUI CI to bare minimum under 1 minute (#423) * Initial plan * Simplify GUI CI to run in under 1 minute with basic validation Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add npm caching to speed up CI runs Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Fix multi-edgelist parsing and centrality computation for GUI workflow (#427) * Initial plan * Fix multi-edgelist parsing and centrality computation friction points Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add comprehensive tests and documentation for GUI user journey Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add interactive demonstration script for GUI improvements Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add final summary report for GUI user journey simulation Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add comprehensive README for API tests directory Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add retry logic and timeouts to pip commands for CI resilience (#431) * Initial plan * Add retry logic and timeouts to pip commands for resilience against transient network errors Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add retry logic and timeouts to all remaining workflow files Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Remove unnecessary markdown documentation files (#437) * Initial plan * Remove unnecessary markdown files and update references Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Restore LLM.md as requested by maintainer Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Optimize GUI performance for large networks with caching and adaptive algorithms (#436) * Initial plan * Add performance optimizations for GUI backend and frontend - Add caching for graph summaries and positions - Optimize graph filtering with set operations - Add adaptive algorithm selection for large graphs - Implement result limiting for very large graphs - Add GZip compression middleware - Optimize frontend job polling with adaptive intervals - Add graph size-aware centrality computation - Improve layout computation for large networks Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add cache management API, HTTP caching headers, tests and documentation - Add cache management endpoints (stats, clear) - Add HTTP Cache-Control headers for graph endpoints - Create comprehensive performance optimization tests - Add detailed performance optimization documentation Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Fix syntax error in graphs.py and improve test dependency handling - Fix parameter order in get_sample endpoint - Add graceful fallback when test dependencies not installed - Validate all Python files compile correctly Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add optimization summary document - Comprehensive summary of all changes - Performance metrics and benchmarks - Quality assurance results - Usage examples and best practices Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Fix TypeScript error: Replace NodeJS.Timeout with number for browser timer Change pollTimerRef type from NodeJS.Timeout to number since setTimeout returns number in browser environments. The NodeJS namespace is not available in DOM/browser TypeScript configurations. Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Implement missing multiplex network metrics (#439) * Initial plan * Implement comprehensive multiplex network metrics - Added 10 new metric functions to multilayer_statistics.py - Implemented multiplex_betweenness_centrality and multiplex_closeness_centrality - Implemented community_participation_coefficient and community_participation_entropy - Implemented layer_redundancy_coefficient and unique_redundant_edges - Implemented multiplex_rich_club_coefficient - Implemented percolation_threshold and targeted_layer_removal - Implemented compute_modularity_score utility function - Added comprehensive test suite with 16 passing tests - Created demonstration example script - Updated LLM.md with complete documentation of new metrics Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * Add RST documentation for new multiplex metrics - Added comprehensive section to algorithm_guide.rst covering all 10 new metrics - Included usage examples, complexity analysis, and references for each metric - Updated basic_usage_analysis_multiplex.rst to reference the new example - Documentation follows existing RST style and structure Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> * chore: update LOC badge to 75.0K [skip ci] * Initial plan * Merge from master and bump scikit-learn from 1.4.0 to 1.5.0 Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> --------- Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com> Co-authored-by: SkBlaz <10035780+SkBlaz@users.noreply.github.com> Co-authored-by: SkBlaz <SkBlaz@users.noreply.github.com> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
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OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting If you change your mind, just re-open this PR and I'll resolve any conflicts on it. |
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Bumps scikit-learn from 1.4.0 to 1.5.0.
Release notes
Sourced from scikit-learn's releases.
... (truncated)
Commits
b51d0c9trigger whell builder [cd build]919ae9bMAINT Reoder what's new for 1.5 (#29039)0ac28adDOC Release highlights 1.5 (#29007)729b54dtest py3.12 against numpy 2 [cd build]1e50434set versionffbe4abDOC remove obsolete SVM example (#27108)4647729DOC Fix time complexity of MLP (#28592)9bd7047FIX convergence criterion of MeanShift (#28951)b79420fFIX add long long for int32/int64 windows compat in NumPy 2.0 (#29029)37f544dDOC replace pandas with Polars in examples/gaussian_process/plot_gpr_co2.py (...Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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